How is Nitrogen Removed from Wastewater
- Stanislav M.

- Nov 5
- 12 min read
Updated: 2 days ago

Nitrogen contamination in waste water represents one of the most significant environmental challenges in modern wastewater treatment. When untreated nitrogen-rich wastewater is discharged into aquatic environments, it triggers eutrophication—an excessive nutrient enrichment that causes algal blooms, oxygen depletion, and the collapse of aquatic ecosystems. Understanding how nitrogen is removed from wastewater is essential for environmental protection, regulatory compliance, and sustainable water management. This comprehensive guide explores the diverse methods, technologies, and biological processes used to effectively remove nitrogen from wastewater across industrial, municipal, and specialized treatment applications.
Nitrogen removal from wastewater is accomplished through multiple complementary technologies including biological processes (nitrification-denitrification, anammox), physical methods (air stripping, membrane separation), and chemical processes (ion exchange, breakpoint chlorination). The selection of appropriate nitrogen removal technology depends on wastewater characteristics, treatment efficiency requirements, energy constraints, and economic considerations.
Why Nitrogen Removal from Wastewater is Critical
Before exploring how nitrogen is removed, understanding why nitrogen removal is essential provides important context for waste water treatment decisions.
Environmental Consequences of Excess Nitrogen
Untreated nitrogen in wastewater creates multiple environmental problems:
Eutrophication: Excess nitrogen stimulates excessive growth of algae and aquatic plants. When these organisms die and decompose, bacterial decomposition consumes dissolved oxygen, creating hypoxic (low-oxygen) zones where aquatic life cannot survive. These "dead zones" now cover thousands of square kilometers in coastal regions worldwide.
Drinking Water Contamination: High nitrate levels in surface and groundwater pose health risks, particularly to infants. Nitrate can be converted to nitrite in the gastrointestinal tract, potentially causing methemoglobinemia ("blue baby syndrome").
Greenhouse Gas Emissions: Incomplete nitrogen removal pathways produce nitrous oxide (N₂O), a greenhouse gas approximately 300 times more potent than CO₂ on a 100-year timescale.
Regulatory Requirements: Most jurisdictions mandate biological nitrogen removal from municipal wastewater, typically requiring treated effluent to contain less than 5-15 mg/L total nitrogen.
Nitrogen Forms in Wastewater
Wastewater nitrogen exists in multiple chemical forms, each requiring different removal approaches:
Ammonia (NH₃) and ammonium (NH₄⁺): Typical concentration 30-50 mg/L in municipal wastewater
Nitrite (NO₂⁻): Generally present in low concentrations, produced during nitrification
Nitrate (NO₃⁻): Produced during nitrification, concentration can reach 40-80 mg/L in treated effluent
Organic nitrogen: Amino acids, urea, and other nitrogen-containing compounds, typically 10-20 mg/L
Effective nitrogen removal must address all these forms through complementary processes.
Biological Nitrogen Removal: The Dominant Approach
Biological nitrogen removal is the most economical, widely adopted, and environmentally sustainable method for treating wastewater nitrogen. This approach utilizes specialized bacteria to convert nitrogenous compounds into harmless nitrogen gas (N₂) that escapes to the atmosphere.
The Traditional Nitrification-Denitrification Process
Nitrification-denitrification (ND) represents the traditional and still most common biological nitrogen removal approach globally.
Nitrification: Step 1 - Ammonia Oxidation
Nitrification is the aerobic (oxygen-requiring) oxidation of ammonia to nitrate through two sequential biological steps.
Step 1A: Ammonia to Nitrite (Nitritation)
Specialized bacteria called ammonia-oxidizing bacteria (AOB), primarily Nitrosomonas europaea and related species, catalyze this reaction under strictly aerobic conditions:
2 NH₄⁺ + 3 O₂ → 2 NO₂⁻ + 4 H⁺ + 2 H₂O
Key characteristics:
Requires substantial dissolved oxygen (typically >2 mg/L)
Produces hydrogen ions that lower pH
Slow-growing bacteria with long solids retention time (SRT) requirements (8-15 days)
Sensitive to environmental perturbations (temperature fluctuations, toxics)
Removal achieved: Complete conversion of ammonia to nitrite, typically 100% if ammonia oxidation completes
Step 1B: Nitrite to Nitrate (Nitrite Oxidation)
Nitrite-oxidizing bacteria (NOB), particularly Nitrobacter and Nitrospira species, catalyze the second nitrification step:
2 NO₂⁻ + O₂ → 2 NO₃⁻
Key characteristics:
Also requires aerobic conditions
Typically faster than ammonia oxidation in most systems
Can be selectively inhibited to enable "short-path" nitrification (stopping at nitrite)
Sensitive to high nitrite and nitrite oxidation rate (NOR) inhibitors
Combined nitrification result: Complete conversion of ammonia to nitrate, achieving 95-100% ammonia removal
Nitrification System Requirements
For optimal nitrification performance:
Dissolved Oxygen (DO):
Minimum: >1.5 mg/L
Optimal: 2-4 mg/L (higher DO ensures nitrification completion)
Energy cost increases substantially above 4 mg/L
Retention Time:
At least 8-15 days solids retention time (SRT) for nitrifier growth
Shorter SRT (4-6 days) results in nitrifier washout and loss of nitrification
Longer SRT (>20 days) maximizes nitrification but increases reactor volume
pH:
Optimal range: 6.8-8.0
Below pH 6.5: Nitrification rates decline significantly
Above pH 8.5: Activity begins declining
Nitrification produces H⁺ ions, lowering pH; alkalinity addition often required
Temperature:
Optimal: 25-35°C
Below 10°C: Nitrification rates become negligible
Cold-weather nitrification requires longer SRT and optimized design
BOD/COD Considerations:
Nitrifiers require minimal organic carbon
High BOD (heterotrophic) bacteria outcompete nitrifiers at low SRT
Typical requirement: <100 mg BOD/L for nitrification stability
Ammonia Concentration:
Nitrifiers can handle concentrations from <1 mg/L to >100 mg/L
Very high ammonia (>200 mg/L) may require staged treatment or inhibitor management
Denitrification: Step 2 - Nitrate to Nitrogen Gas
Denitrification is the anaerobic (oxygen-free) reduction of nitrate to nitrogen gas, a process that permanently removes nitrogen from wastewater.
The Denitrification Pathway
Specialized denitrifying bacteria, primarily Pseudomonas species and other heterotrophs, catalyze sequential reduction under anoxic conditions (dissolved oxygen <0.5 mg/L):
Step 1: Nitrate to NitriteNO₃⁻ → NO₂⁻ (catalyzed by nitrate reductase)
Step 2: Nitrite to Nitric OxideNO₂⁻ → NO (catalyzed by nitrite reductase)
Step 3: Nitric Oxide to Nitrous OxideNO → N₂O (catalyzed by nitric oxide reductase)
Step 4: Nitrous Oxide to Nitrogen GasN₂O → N₂ (catalyzed by nitrous oxide reductase)
Overall denitrification reaction:NO₃⁻ + 1.25 CH₃COO⁻ → 0.5 N₂ + 2 HCO₃⁻ + 0.25 H⁺
Key characteristics:
Requires anoxic conditions (DO < 0.5 mg/L, preferably < 0.1 mg/L)
Requires organic carbon as electron donor and energy source
Faster-growing than nitrifiers, requires shorter SRT (3-5 days)
Recovers alkalinity lost during nitrification
Denitrification System Requirements
Dissolved Oxygen (DO):
Must be <0.5 mg/L for standard denitrification
<0.1 mg/L optimal for complete denitrification
Any oxygen shifts bacteria to aerobic respiration (uses oxygen rather than nitrate)
Nitrate Availability:
Nitrate produced by nitrification stage must be recycled to denitrification zone
Internal recycle rate typically 200-300% of plant influent flow
High recycle rates increase operating costs
Carbon Source:
Critical requirement: heterotrophic denitrifiers require organic carbon
Wastewater BOD often provides sufficient carbon
Formula: 1.25 mg BOD needed per 1 mg NO₃⁻-N removed
Low-BOD wastewaters may require external carbon (methanol, acetate)
Carbon limitation is major cost factor in many systems
Retention Time:
Typical 2-4 hours anoxic retention time sufficient
Lower than nitrification requirement due to faster denitrifier growth
pH:
Optimal: 6.5-8.0
Denitrification produces alkalinity, raising pH
Helps balance pH drop from nitrification
Temperature:
Optimal: 20-35°C
More temperature-tolerant than nitrification
Still shows significant activity at 10-15°C
Nitrification-Denitrification Performance
Removal efficiency:
Typical: 80-95% total nitrogen removal
Can exceed 95% with optimization
Residual effluent typically 5-15 mg/L total nitrogen
Oxygen demand:
Nitrification requires approximately 4.3 mg O₂ per mg of NH₄⁺-N oxidized
50% of treatment plant energy often goes to nitrification aeration
Carbon requirement:
External carbon addition typically needed for low-BOD wastewaters
Adds 10-15% to operational costs
Advanced Nitrogen Removal: The Anammox Process
The anaerobic ammonium oxidation (anammox) process represents a breakthrough biological nitrogen removal technology that offers significant advantages over traditional nitrification-denitrification.
How Anammox Works
Anammox bacteria (anaerobic ammonium-oxidizing bacteria, primarily Candidatus Brocadia and related genera) directly oxidize ammonium to nitrogen gas under anaerobic conditions using nitrite as the electron acceptor:
NH₄⁺ + NO₂⁻ → N₂ + 2 H₂O
This remarkable reaction converts two forms of inorganic nitrogen directly to harmless nitrogen gas without requiring any organic carbon.
Anammox Advantages
Compared to traditional nitrification-denitrification:
Energy Savings:
Oxygen demand reduced by 60%
No aeration of anoxic zone needed
Overall energy requirement reduced by 40-60%
Estimated operational cost reduction: 30-50%
Carbon Independence:
Completely eliminates need for external carbon source
Particularly valuable for low-BOD wastewaters (municipal effluent, reject water, landfill leachate)
Removes $10-20/1000 m³ in operational costs from carbon addition
Reduced Sludge Production:
Anammox bacteria have low yield (biomass produced per substrate consumed)
Sludge production reduced by 90% compared to nitrification-denitrification
Annual sludge disposal cost reduction: 80-87%
Rapid Nitrogen Removal:
Nitrogen removal rates: 0.5-2.5 kg N/m³/day
Achievable in compact reactors
50-75% smaller footprint than comparable nitrification-denitrification systems
Greenhouse Gas Reduction:
Minimal N₂O production
When combined with partial nitrification (stopping ammonia oxidation at nitrite), even more N₂O reduction
Nitrogen Removal Efficiency:
Achievable >90% nitrogen removal
Systems reaching 99% nitrogen removal efficiency
Anammox Implementation Challenges
Startup Duration:
Anammox bacteria grow slowly
Reactor startup period: 6-18 months to achieve stable operation
Requiring considerable planning and patience
Biomass Sensitivity:
Anammox bacteria sensitive to oxygen exposure
Sensitive to high dissolved oxygen, solids retention time fluctuations
Sensitive to certain toxicants
Operational Requirements:
Requires careful temperature control (optimal 30-35°C, viable 10-40°C)
Requires precise nutrient ratio control (NH₄⁺:NO₂⁻ balance critical)
Requires stable operating parameters to maintain performance
Partial Nitrification-Anammox (PNA) Systems
Modern implementations often use partial nitrification-anammox (PNA) systems that combine advantages of both processes:
Configuration:
Partial nitrification stage: Nitrify ammonia to nitrite only (stop before complete nitrification to nitrate)
Anammox stage: Anammox bacteria use produced nitrite + remaining ammonia for nitrogen removal
Advantages of PNA over traditional anammox:
Integrates ammonium oxidation (provides electron donors for anammox) with anammox
Achieves complete nitrogen removal
Reduces external partial nitrification need
Single-stage or two-stage configurations available
Performance:
Nitrogen removal rates: 2-3 kg N/m³/day
Nitrogen removal efficiency: >99%
Oxygen demand: 25% lower than traditional nitrification-denitrification
Physical-Chemical Nitrogen Removal Methods
While biological methods dominate large-scale applications, several physical and chemical methods provide alternatives or complementary treatment.
Air Stripping (Ammonia Volatilization)
Process: Raising wastewater pH to 10.8-11.5 and contacting it with large volumes of air causes dissolved ammonia to volatilize and escape as a gas.
Chemical basis:
At high pH, ammonia shifts from ammonium ion to gaseous ammonia form
Air contact transfers ammonia vapor out of solution
Essentially a mass transfer process, not chemical transformation
Advantages:
Simple operation, reliable, proven at full-scale
Rapid treatment (contact time: 10-20 minutes)
Removes only ammonia (not nitrate)
Disadvantages:
Energy-intensive (fan operation, lime addition heating water)
Limited effectiveness at cold temperatures
Requires pH adjustment (typically with lime), creating alkalinity issues
Ammonia released to atmosphere (air pollution concern in some regions)
Cannot remove nitrate/nitrite
Removal efficiency:
Typical: 50-90% ammonia removal
At pH >11.5 and high air flow: >95% possible
Applications:
Older systems still operating
High-concentration ammonia wastewaters
Combined with other methods
Cost:
Capital: Moderate ($500,000-$5 million for medium plant)
Operations: 20-30% of nitrification-denitrification operating cost
Ion Exchange
Process: Ammonium ions (NH₄⁺) in wastewater are exchanged for other ions on ion-exchange resin beads, effectively removing ammonium from solution.
Chemistry:R-H⁺ + NH₄⁺ → R-NH₄⁺ + H⁺(R = resin functional group)
Advantages:
High removal efficiency (95-99% possible for ammonium)
Compact compared to biological systems
Can handle variable flow rates
Produces concentrated ammonium stream suitable for recovery as fertilizer
Can remove only ammonium (not nitrate/nitrite)
Disadvantages:
Cannot remove nitrate or nitrite
Requires chemical regeneration (salt, acid/base addition)
Regeneration chemical disposal cost
Resin replacement needed periodically
Fouling by multivalent cations and organic matter
Higher capital cost than biological systems
Removal efficiency:
Ammonium removal: 95-99%
Not applicable for nitrate/nitrite
Applications:
High-strength industrial ammonia streams
Compact systems
Ammonia recovery systems
Cost:
Capital: High ($1-5 million for medium capacity)
Operations: $1.50-$4 per 1000 gallons treated
Ammonium recovery can offset some costs
Operational considerations:
Effective ammonia concentration: 20-200 mg/L optimal
Higher/lower concentrations reduce efficiency
Wastewater pretreatment often required to prevent fouling
Breakpoint Chlorination
Process: Chlorine is added to ammonia-containing wastewater in specific stoichiometric ratios to oxidize ammonia to nitrogen gas through a series of oxidation reactions.
Chemistry: The complex process involves multiple chloramine formation and oxidation steps, with net reaction:
2 NH₃ + 3 Cl₂ → N₂ + 6 HCl
Advantages:
Rapid treatment (instantaneous, seconds)
Disinfection as secondary benefit
Well-understood process
Disadvantages:
High chemical cost (chlorine expensive)
Generates toxic chlorinated byproducts (trihalomethanes, haloacetic acids)
Cannot remove nitrate (only ammonia)
Dangerous chemical handling (chlorine gas hazardous)
Often requires dechlorination before discharge
Incomplete reactions can produce toxic chloramines
Removal efficiency:
Ammonia removal: >99% possible
Nitrate/nitrite: No removal
Applications:
Limited modern use (being phased out)
Emergency treatment situations
Very high ammonia concentrations (residual chlorination)
Cost:
Chemical costs: Very high (chlorine expensive, large quantities needed)
Estimated cost: $2-6 per 1000 gallons treated
Membrane Separation Technologies
Reverse Osmosis (RO):
High-pressure membranes remove ammonium and nitrate
Removes ~95% of both ammonia and nitrate
Cannot differentiate nitrogen forms
Very high pressure requirement (200-400 psi) makes it energy-intensive
Produces concentrated brine requiring disposal
Electrodialysis (ED):
Electric field drives ion migration across ion-selective membranes
Can remove specific ions (ammonium) from solution
Energy-intensive
Produces concentrated salt stream
Advantages of membrane methods:
High removal efficiency
Can remove both ammonium and nitrate simultaneously
Reliable, consistent performance
Disadvantages:
High capital cost
Very high operating cost (energy-intensive)
Membrane fouling requiring frequent maintenance/replacement
Produces concentrated waste streams requiring disposal
Applications:
Polishing existing biological treatment
Small systems or specialty applications
Where other methods unsuitable
Comparison of Nitrogen Removal Methods
Method | Removes Ammonia? | Removes Nitrate? | Energy Use | Capital Cost | Operating Cost | Best Applications |
Nitrification-Denitrification | Yes | Yes | High | Moderate | Moderate | Most municipal plants, standard method |
Anammox | Yes | Yes | Low | Moderate-High | Low | Low-BOD wastewater, compact systems |
Partial Nitrification-Anammox | Yes | Yes | Very Low | High | Very Low | Energy-conscious facilities, industrial |
Air Stripping | Yes (only) | No | Moderate | Moderate | Moderate-High | High ammonia concentration, older systems |
Ion Exchange | Yes (only) | No | Low | High | High-Very High | Ammonia recovery, high-strength streams |
Breakpoint Chlorination | Yes (only) | No | Low | Low | Very High | Emergency treatment only |
Reverse Osmosis | Yes | Yes | Very High | High | Very High | Polishing, specialty applications |
Electrodialysis | Yes | Yes | Very High | High | Very High | Specialty applications |
Integrated Nitrogen Removal Systems
Modern wastewater treatment plants often employ integrated approaches that combine multiple methods:
Typical Municipal Plant Configuration
Stage 1 - Primary Treatment: Physical screening and sedimentation (removes settleable solids)
Stage 2 - Activated Sludge with Nitrification-Denitrification:
Anoxic zone (denitrification): 2-4 hours retention
Aerobic zone (nitrification): 4-8 hours retention
Secondary clarifier: Solids separation
Stage 3 - Advanced Biological Treatment (Optional):
Additional anoxic denitrification zone
Simultaneous nitrification-denitrification (SND) reactors
Enhanced biological phosphorus removal
Stage 4 - Tertiary/Polishing Treatment:
Sand filtration
Constructed wetlands
Sometimes additional nitrification (if more removal needed)
Stage 5 - Disinfection:
UV irradiation
Chlorination
Ozonation
Simultaneous Nitrification-Denitrification (SND)
SND systems achieve partial nitrification and denitrification in the same aeration tank through:
Spatial separation: Biofilm surfaces have oxygen gradients—outer layers aerobic (nitrification), inner layers anoxic (denitrification)
Temporal cycling: Alternating aeration and non-aeration periods in a single reactor
Advantages:
No separate anoxic zone required
Reduced treatment volume
No internal recycle needed (reduces pumping energy)
Performance:
Nitrogen removal: 60-85%
Less complete than sequential nitrification-denitrification
More effective with attached-growth systems (biofilm reactors)
Factors Affecting Nitrogen Removal Efficiency
Multiple operational and environmental factors control nitrogen removal effectiveness:
Temperature Effects
Temperature dramatically influences both nitrification and denitrification rates:
Winter operation (5-10°C): Nitrification rates drop 50-80%, may require process modifications
Warm conditions (20-25°C): Normal performance with standard SRT
Hot conditions (>30°C): Accelerated nitrification possible, may enable SRT reduction
Temperature control strategy:
Design for coldest expected conditions
Implement longer SRT in cold climates
Consider heat recovery from treated effluent in some cases
Dissolved Oxygen (DO) Management
Precise DO control is critical for optimal performance:
Nitrification zones: Maintain DO 2-4 mg/L (balance between nitrification rate and aeration cost)
Anoxic zones: Maintain DO <0.5 mg/L (complete denitrification), preferably <0.1 mg/L
Fine-bubble aeration: Most efficient method (85-90% oxygen transfer efficiency)
Coarse-bubble or mechanical: Lower efficiency (60-75%), but still used in many plants
Influent C/N Ratio
The ratio of biodegradable carbon (BOD) to nitrogen affects denitrification:
High C/N (>2): Excess carbon, allows step-feeding strategy to external reactors
Optimal C/N (1.2-1.5): Perfect for nitrification-denitrification
Low C/N (<1.0): Carbon limitation, may require external carbon addition (methanol, acetate)
Solids Retention Time (SRT) Management
SRT fundamentally controls system performance:
Short SRT (3-5 days): Heterotrophic bacteria predominate, poor nitrification
Moderate SRT (8-15 days): Excellent nitrification and denitrification balance
Long SRT (>20 days): Excellent nitrification, but increased biosolids handling
Optimal SRT depends on temperature and specific system design.
Nitrogen Removal Applications by Industry
Municipal Wastewater
Typical characteristics:
Influent total nitrogen: 40-80 mg/L
Target effluent: <10-15 mg/L
Typical removal efficiency: 80-95%
Standard approach: Nitrification-denitrification in activated sludge
Food Processing Industry
Characteristics:
Variable influent composition
High organic loading (BOD: 500-2000 mg/L)
Variable nitrogen concentration
Intermittent operation
Approach:
Two-stage treatment (anaerobic followed by aerobic)
Sequencing batch reactors for operational flexibility
Pharmaceutical Manufacturing
Characteristics:
High-strength wastewater (BOD >5000 mg/L)
Variable composition
Potentially toxic compounds
High ammonia (>200 mg/L)
Approach:
Pretreatment for toxicity removal
Multi-stage biological treatment
Sometimes combined with physical-chemical methods
Landfill Leachate
Characteristics:
High ammonia (500-1500 mg/L NH₄⁺-N)
Lowbiodegradable organic matter (BOD:COD ratio ~0.3)
Presence of recalcitrant compounds
Varying nitrogen/COD ratios
Approach:
Anammox or partial nitrification-anammox ideal
High-strength anammox systems
Sometimes combined with air stripping
Future Trends in Nitrogen Removal
Emerging technologies and approaches are advancing nitrogen removal capabilities:
Electrochemical Methods
Nitrate reduction using electric current shows promise for:
Compact systems (no biological culture time)
Variable influent handling
Combined with other processes
Bioelectrochemical Systems
Coupling microbes with electrodes for nitrogen removal:
Still in research/pilot stage
Potential for very compact systems
Integration with energy recovery possible
Advanced Control Strategies
Real-time monitoring and control systems:
Automated SRT adjustment
Nutrient ratio optimization
Dissolved oxygen fine-tuning
Predicted performance modeling
Resource Recovery Focus
Transition from "waste treatment" to "resource recovery":
Ammonia recovery as fertilizer product
Biogas energy from sludge
Nutrient recovery combined with nitrogen removal
Conclusion
Nitrogen removal from wastewater has evolved into a mature, multifaceted discipline encompassing biological, chemical, and physical treatment approaches. The dominant method—biological nitrification-denitrification—remains highly effective and economical for municipal and many industrial applications. However, emerging technologies like anammox and partial nitrification-anammox offer significant advantages in specific contexts, particularly for low-carbon wastewaters requiring maximum energy efficiency.
Successful nitrogen removal requires careful consideration of wastewater characteristics, treatment efficiency goals, energy and economic constraints, and site-specific operational conditions. Future wastewater treatment will increasingly focus on integrating nitrogen removal with other sustainability goals including energy recovery, resource reclamation, and minimizing greenhouse gas emissions.
For facilities using biological processes, optimizing solids retention time, dissolved oxygen control, operational temperature management, and influent carbon availability remains central to achieving reliable, cost-effective nitrogen removal. As regulatory requirements become more stringent and energy costs increase, advanced methods and process integration will play increasingly important roles in modern wastewater treatment systems.
Key Takeaways
Nitrification-Denitrification: Traditional approach achieving 80-95% nitrogen removal through sequential bacterial oxidation and reduction
Nitrification: Requires aerobic conditions, high SRT (8-15 days), achieves 95-100% ammonia removal
Denitrification: Requires anoxic conditions, organic carbon, achieves complete nitrate removal to N₂
Anammox Process: Energy-efficient alternative removing 60% less oxygen, 90% less sludge, eliminating carbon requirement
Partial Nitrification-Anammox: Advanced integration achieving >99% nitrogen removal with minimal energy
Air Stripping: Physical method removing ammonia only, rapid but energy-intensive
Ion Exchange: Chemical method removing ammonia only, high cost but enabling recovery
Breakpoint Chlorination: Chemical oxidation (minimal modern use, expensive)
Membrane Methods: High removal but very high energy and cost
System Selection Depends On: BOD/COD content, ammonia concentration, energy constraints, footprint requirements
Temperature Impact: Cold weather reduces nitrification rates, requiring SRT adjustment
DO Management: Critical for both nitrification (2-4 mg/L) and denitrification (<0.5 mg/L) performance
Cost Comparison: Biological treatment most economical for most applications (nitrification-denitrification 50-70% cheaper than physical-chemical methods)


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